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Publications

This list includes publications for which the GenoToul Bioinformatics facility has been used (hardware infrastructure, Funding, or Staff members). All Sigenae's publications have used the GenoToul Bioinformatics hardware infrastructure.

2007

1. Madoui, M.-A., Gaulin, E., Mathé, C., San Clemente, H., Couloux, A., Wincker, P., and Dumas, B. (2007). AphanoDB: A genomic resource for Aphanomyces pathogens. BMC Genomics 8, 471. https://doi.org/10.1186/1471-2164-8-471.

2. Bouyssié, D., Peredo, A.G. de, Mouton, E., Albigot, R., Roussel, L., Ortega, N., Cayrol, C., Burlet-Schiltz, O., Girard, J.-P., and Monsarrat, B. (2007). Mascot File Parsing and Quantification (MFPaQ), a New Software to Parse, Validate, and Quantify Proteomics Data Generated by ICAT and SILAC Mass Spectrometric Analyses: Application To the Proteomics Study of Membrane Proteins from Primary Human Endothelial Cells. Molecular & Cellular Proteomics 6, 1621–1637. https://doi.org/10.1074/mcp.T600069-MCP200.

3. Enault, F., Fremez, R., Baranowski, E., and Faraut, T. (2007). Alvira: Comparative genomics of viral strains. Bioinformatics 23, 2178–2179. https://doi.org/10.1093/bioinformatics/btm293.

4. Fremez, R., Faraut, T., Fichant, G., Gouzy, J., and Quentin, Y. (2007). Phylogenetic exploration of bacterial genomic rearrangements. Bioinformatics 23, 1172–1174. https://doi.org/10.1093/bioinformatics/btm070.

5. Gourraud, P.-A., Hoffman, D., Cambon-Thomsen, A., and Feolo, M. (2007). 14th International HLA and Immunogenetics Workshop: Report on mapping microsatellite markers in the major histocompatibility complex region. Tissue Antigens 69, 206–209. https://doi.org/10.1111/j.1399-0039.2006.00770.x.

6. Gourraud, P.-A., Dieudé, P., Boyer, J.-F., Nogueira, L., Cambon-Thomsen, A., Mazières, B., Cornélis, F., Serre, G., Cantagrel, A., and Constantin, A. (2007). A new classification of HLA-DRB1 alleles differentiates predisposing and protective alleles for autoantibody production in rheumatoid arthritis. Arthritis Research & Therapy 9, R27. https://doi.org/10.1186/ar2131.