Publications¶
This list includes publications for which the GenoToul Bioinformatics facility has been used (hardware infrastructure, Funding, or Staff members). All Sigenae's publications have used the GenoToul Bioinformatics hardware infrastructure.
2024¶
1. Kuhl, H., Tan, W.H., Klopp, C., Kleiner, W., Koyun, B., Ciorpac, M., Feron, R., Knytl, M., Kloas, W., Schartl, M., Winkler, C., and Stöck, M. (2024). A candidate sex determination locus in amphibians which evolved by structural variation between X- and Y-chromosomes. Nature Communications 15, 4781. https://doi.org/10.1038/s41467-024-49025-2.
2. Pubert, C., Boniface, M.-C., Legendre, A., Chabaud, M., Carrère, S., Callot, C., Cravero, C., Dufau, I., Patrascoiu, M., Baussart, A., Belmonte, E., Gautier, V., Poncet, C., Zhao, J., Hu, L., Zhou, W., Langlade, N., Vautrin, S., Coussy, C., and Muños, S. (2024). A cluster of putative resistance genes is associated with a dominant resistance to sunflower broomrape. Theoretical and Applied Genetics 137, 103. https://doi.org/10.1007/s00122-024-04594-0.
3. Heurtevin, L., Confolent, C., Lambert, P., Bureau, S., Pascal, T., Shen, Z., and Quilot, B. (2024). A deletion in a photosynthesis-related gene (PpPSAK) determines the anthocyanin accumulation in the mesocarp of French blood-flesh peaches. https://doi.org/10.21203/rs.3.rs-4569955/v1.
4. Dupuy, J., Fouché, E., Noirot, C., Martin, P., Buisson, C., Guéraud, F., Pierre, F., and Héliès-Toussaint, C. (2024). A dual model of normal vs isogenic Nrf2-depleted murine epithelial cells to explore oxidative stress involvement. Scientific Reports 14, 10905. https://doi.org/10.1038/s41598-024-60938-2.
5. Paës, C., Beaumont, M., Gidenne, T., Bébin, K., Duperray, J., Gohier, C., Guené-Grand, E., Rebours, G., Castinel, A., Barilly, C., Gabinaud, B., Bannelier, C., Gress, L., Laperruque, F., Aymard, P., Debrusse, A.-M., Cauquil, L., Pascal, G., and Combes, S. (2024). A multi-omics dataset of the response to early plant polysaccharide ingestion in rabbits. Scientific Data 11, 684. https://doi.org/10.1038/s41597-024-03471-1.
6. Servien, R., and Vialaneix, N. (2024). A random forest approach for interval selection in functional regression. Statistical Analysis and Data Mining: The ASA Data Science Journal 17, e11705. https://doi.org/10.1002/sam.11705.
7. Ben Braiek, M., Szymczak, S., André, C., Bardou, P., Fidelle, F., Granado‐Tajada, I., Plisson‐Petit, F., Sarry, J., Woloszyn, F., Moreno‐Romieux, C., and Fabre, S. (2024). A single base pair duplication in the SLC33A1 gene is associated with fetal losses and neonatal lethality in Manech Tête Rousse dairy sheep. Animal Genetics 55, 644–657. https://doi.org/10.1111/age.13459.
8. Lesur, I., Rogier, O., Sow, M.D., Boury, C., Duplan, A., Garnier, A., Senhaji-Rachik, A., Civan, P., Daron, J., Delaunay, A., Duvaux, L., Benoit, V., Guichoux, E., Le Provost, G., Sanou, E., Ambroise, C., Plomion, C., Salse, J., Segura, V., Tost, J., and Maury, S. (2024). A strategy for studying epigenetic diversity in natural populations: Proof of concept in poplar and oak. Journal of Experimental Botany 75, 5568–5584. https://doi.org/10.1093/jxb/erae266.
9. Neuvial, P., Randriamihamison, N., Chavent, M., Foissac, S., and Vialaneix, N. (2024). A two-sample tree-based test for hierarchically organized genomic signals. Journal of the Royal Statistical Society Series C: Applied Statistics 73, 774–795. https://doi.org/10.1093/jrsssc/qlae011.
10. Cortinovis, G., Vincenzi, L., Anderson, R., Marturano, G., Marsh, J.I., Bayer, P.E., Rocchetti, L., Frascarelli, G., Lanzavecchia, G., Pieri, A., Benazzo, A., Bellucci, E., Di Vittori, V., Nanni, L., Ferreira Fernández, J.J., Rossato, M., Aguilar, O.M., Morrell, P.L., Rodriguez, M., Gioia, T., Neumann, K., Alvarez Diaz, J.C., Gratias, A., Klopp, C., Bitocchi, E., Geffroy, V., Delledonne, M., Edwards, D., and Papa, R. (2024). Adaptive gene loss in the common bean pan-genome during range expansion and domestication. Nature Communications 15, 6698. https://doi.org/10.1038/s41467-024-51032-2.
11. Croville, G., Walch, M., Sécula, A., Lèbre, L., Silva, S., Filaire, F., and Guérin, J.-L. (2024). An amplicon-based nanopore sequencing workflow for rapid tracking of avian influenza outbreaks, France, 2020-2022. Frontiers in Cellular and Infection Microbiology 14, 1257586. https://doi.org/10.3389/fcimb.2024.1257586.
12. Lanoizelet, M., Michel, L., Lagadec, R., Mayeur, H., Guichard, L., Logeux, V., Séverac, D., Martin, K., Klopp, C., Marcellini, S., Castillo, H., Pollet, N., Candal, E., Debiais-Thibaud, M., Boisvert, C., Billoud, B., Schubert, M., Blader, P., and Mazan, S. (2024). Analysis of a shark reveals ancient, Wnt-dependent, habenular asymmetries in vertebrates. Nature Communications 15, 10194. https://doi.org/10.1038/s41467-024-54042-2.
13. Arzelier, A., De Belvalet, H., Pemonge, M.-H., Garberi, P., Binder, D., Duday, H., Deguilloux, M.-F., and Pruvost, M. (2024). Ancient DNA sheds light on the funerary practices of late Neolithic collective burial in southern France. Proceedings of the Royal Society B: Biological Sciences 291, rspb.2024.1215. https://doi.org/10.1098/rspb.2024.1215.
14. Boisseaux, M., Troispoux, V., Bordes, A., Cazal, J., Cazal, S., Coste, S., Stahl, C., and Schimann, H. (2024). Are plant traits drivers of endophytic communities in seasonally flooded tropical forests? American Journal of Botany 111, e16366. https://doi.org/10.1002/ajb2.16366.
15. Veillat, L., Boyer, S., Querejeta, M., Magnoux, E., Roques, A., Lopez-Vaamonde, C., and Roux, G. (2024). Benchmarking three DNA metabarcoding technologies for efficient detection of non-native cerambycid beetles in trapping collections. NeoBiota 96, 237–259. https://doi.org/10.3897/neobiota.96.130195.
16. Mainguy, J., and Hoede, C. (2024). Binette: A fast and accurate bin refinement tool toconstruct high quality Metagenome Assembled Genomes. Journal of Open Source Software 9, 6782. https://doi.org/10.21105/joss.06782.
17. Dufour, A., Kurylo, C., Stöckl, J.B., Laloë, D., Bailly, Y., Manceau, P., Martins, F., Turhan, A.G., Ferchaud, S., Pain, B., Fröhlich, T., Foissac, S., Artus, J., and Acloque, H. (2024). Cell specification and functional interactions in the pig blastocyst inferred from single-cell transcriptomics and uterine fluids proteomics. Genomics 116, 110780. https://doi.org/10.1016/j.ygeno.2023.110780.
18. Baraille, M., Buttet, M., Grimm, P., Milojevic, V., Julliand, S., and Julliand, V. (2024). Changes of faecal bacterial communities and microbial fibrolytic activity in horses aged from 6 to 30 years old. PLOS ONE 19, e0303029. https://doi.org/10.1371/journal.pone.0303029.
19. Malsa, J., Boudesocque-Delaye, L., Wimel, L., Auclair-Ronzaud, J., Dumont, B., Mach, N., Reigner, F., Guégnard, F., Chereau, A., Serreau, D., Théry-Koné, I., Sallé, G., and Fleurance, G. (2024). Chicory (Cichorium intybus) reduces cyathostomin egg excretion and larval development in grazing horses. International Journal for Parasitology: Drugs and Drug Resistance 24, 100523. https://doi.org/10.1016/j.ijpddr.2024.100523.
20. Forest, T., Achaz, G., Marbouty, M., Bignaud, A., Thierry, A., Koszul, R., Milhes, M., Lledo, J., Pons, J.-M., and Fuchs, J. (2024). Chromosome-level genome assembly of the European green woodpecker Picus viridis. G3: Genes, Genomes, Genetics 14, jkae042. https://doi.org/10.1093/g3journal/jkae042.
21. Doniol‐Valcroze, P., Rancilhac, L., Brito, J., Miralles, A., Geniez, P., Benoit, L., Loiseau, A., Leblois, R., Dufresnes, C., and Crochet, P. (2024). Combining RADseq and contact zone analysis to decipher cryptic diversification in reptiles: Insights from the Spiny‐footed Lizard (Reptilia, Lacertidae). Zoologica Scripta 53, 1–15. https://doi.org/10.1111/zsc.12628.
22. Lapalu, N., Simon, A., Lu, A., Plaumann, P.-L., Amselem, J., Pigné, S., Auger, A., Koch, C., Dallery, J.-F., and O’Connell, R.J. (2024). Complete genome of the Medicago anthracnose fungus, Colletotrichum destructivum, reveals a mini-chromosome-like region within a core chromosome. Microbial Genomics 10. https://doi.org/10.1099/mgen.0.001283.
23. Almeida, M.M., Cabrita, E., Laizé, V., Brionne, A., Labbé, C., and Fatsini, E. (2025). Cryopreservation did not affect spermatogonia global methylation profile in Senegalese sole (Solea senegalensis). Cryobiology 118, 105162. https://doi.org/10.1016/j.cryobiol.2024.105162.
24. Fuster, M., Ruiz, T., Lamarque, A., Coulon, M., Legrand, B., Sabart, M., Latour, D., and Mallet, C. (2024). Cyanosphere Dynamic During Dolichospermum Bloom: Potential Roles in Cyanobacterial Proliferation. Microbial Ecology 87, 3. https://doi.org/10.1007/s00248-023-02317-4.
25. Lumeau, A., Bery, N., Francès, A., Gayral, M., Labrousse, G., Ribeyre, C., Lopez, C., Nevot, A., El Kaoutari, A., Hanoun, N., Sarot, E., Perrier, M., Pont, F., Cerapio, J.-P., Fournié, J.-J., Lopez, F., Madrid-Mencia, M., Pancaldi, V., Pillaire, M.-J., Bergoglio, V., Torrisani, J., Dusetti, N., Hoffmann, J.-S., Buscail, L., Lutzmann, M., and Cordelier, P. (2024). Cytidine Deaminase Resolves Replicative Stress and Protects Pancreatic Cancer from DNA-Targeting Drugs. Cancer Research 84, 1013–1028. https://doi.org/10.1158/0008-5472.CAN-22-3219.
26. Tissot, S., Meliani, J., Boutry, J., Brazier, L., Tökölyi, J., Roche, B., Ujvari, B., Nedelcu, A.M., Thomas, F., and Dujon, A.M. (2024). De novo evolution of transmissible tumours in hydra. Proceedings of the Royal Society B: Biological Sciences 291, 20241636. https://doi.org/10.1098/rspb.2024.1636.
27. Harlé, O., Niay, J., Parayre, S., Nicolas, A., Henry, G., Maillard, M.-B., Valence, F., Thierry, A., Guédon, É., Falentin, H., and Deutsch, S.-M. (2024). Deciphering the metabolism of Lactobacillus delbrueckii subsp. Delbrueckii during soy juice fermentation using phenotypic and transcriptional analysis. Applied and Environmental Microbiology, e01936–23. https://doi.org/10.1128/aem.01936-23.
28. Gabrielli, M., Leroy, T., Salmona, J., Nabholz, B., Milá, B., and Thébaud, C. (2024). Demographic responses of oceanic island birds to local and regional ecological disruptions revealed by whole‐genome sequencing. Molecular Ecology 33, e17243. https://doi.org/10.1111/mec.17243.
29. Hubert, J.-N., Iannuccelli, N., Cabau, C., Jacomet, E., Billon, Y., Serre, R.-F., Vandecasteele, C., Donnadieu, C., and Demars, J. (2024). Detection of DNA methylation signatures through the lens of genomic imprinting. Scientific Reports 14, 1694. https://doi.org/10.1038/s41598-024-52114-3.
30. Naudin, S.A., Ferran, A.A., Imazaki, P.H., Arpaillange, N., Marcuzzo, C., Vienne, M., Demmou, S., Bousquet-Mélou, A., Ramon-Portugal, F., Lacroix, M.Z., Hoede, C., Barret, M., Dupouy, V., and Bibbal, D. (2024). Development of an in vitro biofilm model for the study of the impact of fluoroquinolones on sewer biofilm microbiota. Frontiers in Microbiology 15, 1377047. https://doi.org/10.3389/fmicb.2024.1377047.
31. Jousselin, E., Coeur D’Acier, A., Clamens, A.-L., Galan, M., Cruaud, C., Barbe, V., and Manzano-Marín, A. (2024). Discordance between mitochondrial, nuclear, and symbiont genomes in aphid phylogenetics: Who is telling the truth? Zoological Journal of the Linnean Society 201, zlae098. https://doi.org/10.1093/zoolinnean/zlae098.
32. Devailly, G., Fève, K., Saci, S., Sarry, J., Valière, S., Lluch, J., Bouchez, O., Ravon, L., Billon, Y., Gilbert, H., Riquet, J., Beaumont, M., and Demars, J. (2024). Divergent selection for feed efficiency in pigs altered the duodenum transcriptomic response to feed intake and its DNA methylation profiles. Physiological Genomics 56, 397–408. https://doi.org/10.1152/physiolgenomics.00123.2023.
33. Díaz, F.P., Dussarrat, T., Carrasco‐Puga, G., Colombié, S., Prigent, S., Decros, G., Bernillon, S., Cassan, C., Flandin, A., Guerrero, P.C., Gibon, Y., Rolin, D., Cavieres, L.A., Pétriacq, P., Latorre, C., and Gutiérrez, R.A. (2024). Ecological and metabolic implications of the nurse effect of Maihueniopsis camachoi in the Atacama Desert. New Phytologist 241, 1074–1087. https://doi.org/10.1111/nph.19415.
34. Fleitas García, A.-R., Guez, J.-S., Fontanille, P., and Christophe, G. (2024). Enhanced dark fermentative hydrogen production by initial reduction of oxidation-reduction potential. International Journal of Hydrogen Energy 87, 1338–1346. https://doi.org/10.1016/j.ijhydene.2024.08.274.
35. Degalez, F., Charles, M., Foissac, S., Zhou, H., Guan, D., Fang, L., Klopp, C., Allain, C., Lagoutte, L., Lecerf, F., Acloque, H., Giuffra, E., Pitel, F., and Lagarrigue, S. (2024). Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues. Scientific Reports 14, 6588. https://doi.org/10.1038/s41598-024-56705-y.
36. Gargiulo, R., Decroocq, V., González‐Martínez, S.C., Paz‐Vinas, I., Aury, J., Lesur Kupin, I., Plomion, C., Schmitt, S., Scotti, I., and Heuertz, M. (2024). Estimation of contemporary effective population size in plant populations: Limitations of genomic datasets. Evolutionary Applications 17, e13691. https://doi.org/10.1111/eva.13691.
37. Leclaire, S., Bandekar, M., Rowe, M., Ritari, J., Jokiniemi, A., Partanen, J., Allinen, P., Kuusipalo, L., and Kekäläinen, J. (2024). Female reproductive tract microbiota varies with MHC profile. Proceedings of the Royal Society B: Biological Sciences 291, 20241334. https://doi.org/10.1098/rspb.2024.1334.
38. Maman, S., Bardou, P., Lasguignes, E., Oudin, F., Cabanettes, F., and Klopp, C. (2024). Finding and removing introns from RNA-Seq de novoassemblies with IntronSeeker. Journal of Open Source Software 9, 6272. https://doi.org/10.21105/joss.06272.
39. Maire, K., Chamy, L., Ghazali, S., Carratala-Lasserre, M., Zahm, M., Bouisset, C., Métais, A., Combes-Soia, L., De La Fuente-Vizuete, L., Trad, H., Chaubet, A., Savignac, M., Gonzalez De Peredo, A., Subramaniam, A., Joffre, O., Lutz, P.G., and Lamsoul, I. (2024). Fine-tuning levels of filamins a and b as a specific mechanism sustaining Th2 lymphocyte functions. Nature Communications 15, 10574. https://doi.org/10.1038/s41467-024-53768-3.
40. Tusingwiire, T., Garcia-Baccino, C., Carillier-Jacquin, C., Ligonesche, B., Larzul, C., and Vitezica, Z.G. (2024). Genetic determinism of sensitivity to environmental challenges using daily feed intake records in three lines of pigs. Journal of Animal Science 102, skae330. https://doi.org/10.1093/jas/skae330.
41. Cooke, J., Delmas, M., Wieder, C., Rodríguez Mier, P., Frainay, C., Vinson, F., Ebbels, T., Poupin, N., and Jourdan, F. (2024). Genome scale metabolic network modelling for metabolic profile predictions. PLOS Computational Biology 20, e1011381. https://doi.org/10.1371/journal.pcbi.1011381.
42. Gautier, M., Micol, T., Camus, L., Moazami-Goudarzi, K., Naves, M., Guéret, E., Engelen, S., Lemainque, A., Colas, F., Flori, L., and Druet, T. (2024). Genomic Reconstruction of the Successful Establishment of a Feralized Bovine Population on the Subantarctic Island of Amsterdam. Molecular Biology and Evolution 41, msae121. https://doi.org/10.1093/molbev/msae121.
43. Daric, V., Lanoizelet, M., Mayeur, H., Leblond, C., and Darras, S. (2024). Genomic Resources and Annotations for a Colonial Ascidian, the Light-Bulb Sea Squirt Clavelina lepadiformis. Genome Biology and Evolution 16, evae038. https://doi.org/10.1093/gbe/evae038.
44. Postaire, B.D., Devloo‐Delva, F., Brunnschweiler, J.M., Charvet, P., Chen, X., Cliff, G., Daly, R., Drymon, J.M., Espinoza, M., Fernando, D., Glaus, K., Grant, M.I., Hernandez, S., Hyodo, S., Jabado, R.W., Jaquemet, S., Johnson, G., Naylor, G.J.P., Nevill, J.E.G., Pathirana, B.M., Pillans, R.D., Smoothey, A.F., Tachihara, K., Tillet, B.J., Valerio‐Vargas, J.A., Lesturgie, P., Magalon, H., Feutry, P., and Mona, S. (2024). Global genetic diversity and historical demography of the Bull Shark. Journal of Biogeography 51, 632–648. https://doi.org/10.1111/jbi.14774.
45. Hévin, N.M.‐C., Goldstein, P.Z., Aduse‐Poku, K., Barbut, J., Mitchell, A., Zilli, A., Clamens, A., Capdevielle‐Dulac, C., Wahlberg, N., Le Ru, B.P., and Kergoat, G.J. (2024). Habitat opening fostered diversity: Impact of dispersal and habitat‐shifts in the evolutionary history of a speciose afrotropical insect group. Ecography 2024, e07258. https://doi.org/10.1111/ecog.07258.
46. Defaix, R., Lokesh, J., Ghislain, M., Le Bechec, M., Marchand, M., Véron, V., Surget, A., Biasutti, S., Terrier, F., Pigot, T., Panserat, S., and Ricaud, K. (2024). High carbohydrate to protein ratio promotes changes in intestinal microbiota and host metabolism in rainbow trout (Oncorhynchus mykiss) fed plant-based diet. Aquaculture 578, 740049. https://doi.org/10.1016/j.aquaculture.2023.740049.
47. Estay-Ahumada, C.E., Verra, D.M., Roux, M., Sassone, F., Felder-Schmittbuhl, M.-P., Klopp, C., Ciocca, D., Moal, M.L.-L., and Hicks, D. (2024). Hyperglycemia and circadian disruption lead to retinal dysfunction in a stabilized colony of the fat sand rat Psammomys obesus. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 1870, 167118. https://doi.org/10.1016/j.bbadis.2024.167118.
48. Bochereau, P., Maman Haddad, S., Pichon, J., Rossignol, C., Narcy, A., Métayer-Coustard, S., Berri, C., and Le Bihan-Duval, E. (2024). Implication of digestive functions and microbiota in the establishment of muscle glycogen differences between divergent lines for ultimate pH. Scientific Reports 14, 24134. https://doi.org/10.1038/s41598-024-74009-z.
49. López Villavicencio, M., Ledamoisel, J., Poloni, R., Lopez-Roques, C., Debat, V., and Llaurens, V. (2024). Increased Evolutionary Rate in the Z chromosome of Sympatric and Allopatric Species of morpho Butterflies. Genome Biology and Evolution 16, evae227. https://doi.org/10.1093/gbe/evae227.
50. Leroy, T., Faux, P., Basso, B., Eynard, S., Wragg, D., and Vignal, A. (2024). Inferring Long-Term and Short-Term Determinants of Genetic Diversity in Honey Bees: Beekeeping Impact and Conservation Strategies. Molecular Biology and Evolution 41, msae249. https://doi.org/10.1093/molbev/msae249.
51. Brucato, N., Lisant, V., Kinipi, C., Kik, A., Besnard, G., Leavesley, M., and Ricaut, F.-X. (2025). Influence of betel nut chewing on oral microbiome in Papua New Guinea. Evolution, Medicine, and Public Health 13, 36–44. https://doi.org/10.1093/emph/eoae030.
52. Raimbault, A., Brin, A., Manzi, S., Savoie, J.M., Gandois, L., Oliva, P., Fogliani, O., Roy-Camille, C., Gratacap, L., and Roy, M. (2024). Influence of habitat fragmentation and habitat amount on soil fungi communities in ancient forests. Landscape Ecology 39, 19. https://doi.org/10.1007/s10980-024-01821-3.
53. Cerapio, J.P., Gravelle, P., Quillet‐Mary, A., Valle, C., Martins, F., Franchini, D., Syrykh, C., Brousset, P., Traverse‐Glehen, A., Ysebaert, L., Fournie, J., and Laurent, C. (2024). Integrated spatial and multimodal single‐cell transcriptomics reveal patient‐dependent cell heterogeneity in splenic marginal zone lymphoma. The Journal of Pathology 263, 442–453. https://doi.org/10.1002/path.6296.
54. Oury, N., and Magalon, H. (2024). Investigating the potential roles of intra-colonial genetic variability in Pocillopora corals using genomics. Scientific Reports 14, 6437. https://doi.org/10.1038/s41598-024-57136-5.
55. Brondani, M., Robin, A., Marchal, J., Pablo, A.-L., Personne, A., Desmarais, E., Cerqueira, F., Mahé, F., Degrune, F., Guillemot, J., H. S. Brancalion, P., and Fromin, N. (2024). Large Variability of Soil Microbial Diversity and Functions in an Over 20-Year Old Eucalyptus Grandis Plantation. https://doi.org/10.2139/ssrn.4993280.
56. Schmitt, S., Heuret, P., Troispoux, V., Beraud, M., Cazal, J., Chancerel, É., Cravero, C., Guichoux, E., Lepais, O., Loureiro, J., Marande, W., Martin-Ducup, O., Vincent, G., Chave, J., Plomion, C., Leroy, T., Heuertz, M., and Tysklind, N. (2024). Low-frequency somatic mutations are heritable in tropical trees Dicorynia guianensis and Sextonia rubra. Proceedings of the National Academy of Sciences 121, e2313312121. https://doi.org/10.1073/pnas.2313312121.
57. Besnard, F., Guintard, A., Grohs, C., Guzylack-Piriou, L., Cano, M., Escouflaire, C., Hozé, C., Leclerc, H., Buronfosse, T., Dutheil, L., Jourdain, J., Barbat, A., Fritz, S., Deloche, M.-C., Remot, A., Gaussères, B., Clément, A., Bouchier, M., Contat, E., Relun, A., Plassard, V., Rivière, J., Péchoux, C., Vilotte, M., Eche, C., Kuchly, C., Charles, M., Boulling, A., Viard, G., Minéry, S., Barbey, S., Birbes, C., Danchin-Burge, C., Launay, F., Mattalia, S., Allais-Bonnet, A., Ravary, B., Millemann, Y., Guatteo, R., Klopp, C., Gaspin, C., Iampietro, C., Donnadieu, C., Milan, D., Arcangioli, M.-A., Boussaha, M., Foucras, G., Boichard, D., and Capitan, A. (2024). Massive detection of cryptic recessive genetic defects in dairy cattle mining millions of life histories. Genome Biology 25, 248. https://doi.org/10.1186/s13059-024-03384-7.
58. Zhang, J., Li, C., Li, W., Shi, Z., Liu, Z., Zhou, J., Tang, J., Ren, Z., Qiao, Y., and Liu, D. (2024). Mechanism of luteolin against non-small-cell lung cancer: A study based on network pharmacology, molecular docking, molecular dynamics simulation, and in vitro experiments. Frontiers in Oncology 14, 1471109. https://doi.org/10.3389/fonc.2024.1471109.
59. Darriaut, R., Marzari, T., Lailheugue, V., Tran, J., Martins, G., Marguerit, E., Masneuf-Pomarède, I., and Lauvergeat, V. (2024). Microbial dysbiosis in roots and rhizosphere of grapevines experiencing decline is associated with active metabolic functions. Frontiers in Plant Science 15, 1358213. https://doi.org/10.3389/fpls.2024.1358213.
60. Costes, V., Sellem, E., Marthey, S., Hoze, C., Bonnet, A., Schibler, L., Kiefer, H., and Jaffrezic, F. (2024). Multi-omics data integration for the identification of biomarkers for bull fertility. PLOS ONE 19, e0298623. https://doi.org/10.1371/journal.pone.0298623.
61. Blanquart, E., Ekren, R., Rigaud, B., Joubert, M.-V., Baylot, V., Daunes, H., Cuisinier, M., Villard, M., Carrié, N., Mazzotti, C., Lucca, L.E., Perrot, A., Corre, J., Walzer, T., Avet-Loiseau, H., Axisa, P.-P., and Martinet, L. (2024). NK cells with adhesion defects and reduced cytotoxic functions are associated with a poor prognosis in multiple myeloma. Blood 144, 1271–1283. https://doi.org/10.1182/blood.2023023529.
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